Status: Running
General Objective: The objective of this project is to train Ecuadorian researchers who carry out development and research in areas related to the exploration and exploitation of genomic information in statistical and computational analysis that allows the integration of the different information analyzes in a single computer system. Free to use, such as BioConductor on the R platform for the analysis and interpretation of genomic data.
Participants:
- Lenin Ron Garrido
- Freddy Proano Perez
- richar rodriguez
Organizers:
- ECU
Research areas:
- Genomics
- bioinformatics
- Genetics
- Epidemiology
- proteomics
- Pharmacology
- Human Biotechnology
- animal and vegetable
- Systematics and Phylogeny
- Microbiology
Contents:
- Explanation of the Syllabus and methodology
- Introduction to R and Rstudio
- Introduction to Expression Microarray Technology
- Expression Microarray Preprocessing
- Differential Expression Analysis for Microarrays
- GSEA
- Introduction to NGS
- Quality Control
- Alignment and Counting (Part I)
- Alignment and Counting (Part II)
- Differential Expression for RNA-Seq
- Remainders of the week + Topics: GWAS / QTL
- review
- Preparation of the BioConductor Manual with Genomics applications
